CDS

Accession Number TCMCG017C23719
gbkey CDS
Protein Id OMO75441.1
Location complement(join(12501..12578,12680..12750,12964..12997,13105..13197,13905..14015,14105..14170,14288..14419,15187..15318,15405..15491,15880..16854))
GeneID InterPro:IPR000306
Organism Corchorus olitorius
locus_tag COLO4_26114

Protein

Length 592aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01019206.1
Definition Zinc finger, FYVE-type [Corchorus olitorius]
Locus_tag COLO4_26114

EGGNOG-MAPPER Annotation

COG_category S
Description zinc finger
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006972        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0030139        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0044352        [VIEW IN EMBL-EBI]
GO:0044354        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045335        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAACAAGGAGATTACAGCTCCTACTATCAATTCCCTCACCTTTCAAACCCCAGCCCTAACCCGAATCCGAACCCAACACCTACCGAATTTCACCAAACGTCTTACGCATCGGCTCCGCCCTTCACCTCCGGTTACGCTTCCAACGATTACTCCGGTTATCCCCCAAGTTACCCTCCCTATCAGCAAAATCCCGATCCTGCTCCTCCCACCGCACCTTCTTATGCTCCACCGTCAGGGACAACTACTCCGGTGTCACCCACGCTAACTTCGCAATCATCGTTTAATCAACAACCGATCGCTCCACAGTCGGCGGCCGCTGCTCCTACTTTCCCGCCTTATGATTCACACGTTCCCTATCAGCCACCGACTTCCCAGCCACCTTATTACCAACCTTATGATCAGCATCAGACGGCTCCCAGCTATGGCCCTCCCCCGTCAAACGCTAACCCTACCCCAAATCCGCCTTACTATTCATCCCCATATAGCCAAGTAGGATCATCTGTATCCTCCGTCCCTCCTGCATATGATAGCCCCTATGACAATTCGCTGAAATTCGACCAGGGCGGCGGTGGTTATTATGACGATAAATTCGGAGGAGGCTATAACCGAAGCAGATCCGATTTGGGATCCGACTTCTATGGGAAGGGATCAGATAGCTATTCAAGATACAGTGATGATGGTGGATATGGGGACGGTGTTTATGCTTATCAAGGAGGCAAGGCAGAGCCTTATGGGGCACGTGGCACAGCTCCAAAATCGTCAACTTGGGTTCAATTCGACGATTATGGGCGGTCTATTAATCTCCCTTCTGGGAAGGACTCGTCCAGCGGGTCAGGTTCAGGTTCTGCTAAGATTGTGAGGGCGGTGCCAAAGGCGGAGACCCAGGAAGATGTGAAGAGTGGGGTCCAGAAGTTTCGGGTGAGGATGTTGTCCGAAGGTGGAGGACAGGGCCCAATGGATGTACTGTGCCAGATCGGTTTGGACGGGATTCGCATGCTTGATCCAAGTACCAGTCGAACATTGAGGATATATCCTCTTGAGAACATCACTAGATGTGAAGTGGTCGACTCATCTACCCTTGCATTCTGGTCCAAGAGCTCTGTTGATATTGAACCAAGACGGATCAGGTTGCAATCAAACAGTTACACTAGAAACACCCTTCTGGATACTATAACAGCTGCTACTGTGCAGATCAAGGAGATGGGTGGAAGAAGCAGGCCTCCTGAATCTGTAAAGACTACCGAGCAACCTACAGAAAAGAAGAAAGGATTTGCTGATTGGATGAATTTGATAAAGCCTGGCATGGAGGAGAAAGATCATTGGGTCCCTGATGAAGCTGTTTCAAAGTGCACGGCATGTGCAACTGATTTTTCGGCTTTTGTGCGGAGGCACCACTGCAGGAACTGTGGGGATATTTTCTGTGACAAGTGCACCCAGGGTAGAATCGCGCTAACTGCTGATGAGAATGCTCAACCAGTTCGGGTTTGCGACAGATGCGTGGCTGAAGTAACTCAGAGGCTGAGTAATGCTAGGGAAGCAGCAAGTAAGCCTGCTGGACTACAGAGTCATGAGGATCTTGCTAAGAAGCTTCAGGAGGAGATGGAAAGGAATCGCAGAGCATCATCAGGATCCAAGTCTGATGGATCCGGTAGGCGGATGAAGGAAGTTGCCTGTCCTACGTGCACTGTTCATTTGCAGGTCCAAGTTCCCAGCTCAGGTTCTGAGACCATTGAATGTGGAGTTTGCCAGCATCCTTTCCTTGTTAGTGCCCATTAA
Protein:  
MQQGDYSSYYQFPHLSNPSPNPNPNPTPTEFHQTSYASAPPFTSGYASNDYSGYPPSYPPYQQNPDPAPPTAPSYAPPSGTTTPVSPTLTSQSSFNQQPIAPQSAAAAPTFPPYDSHVPYQPPTSQPPYYQPYDQHQTAPSYGPPPSNANPTPNPPYYSSPYSQVGSSVSSVPPAYDSPYDNSLKFDQGGGGYYDDKFGGGYNRSRSDLGSDFYGKGSDSYSRYSDDGGYGDGVYAYQGGKAEPYGARGTAPKSSTWVQFDDYGRSINLPSGKDSSSGSGSGSAKIVRAVPKAETQEDVKSGVQKFRVRMLSEGGGQGPMDVLCQIGLDGIRMLDPSTSRTLRIYPLENITRCEVVDSSTLAFWSKSSVDIEPRRIRLQSNSYTRNTLLDTITAATVQIKEMGGRSRPPESVKTTEQPTEKKKGFADWMNLIKPGMEEKDHWVPDEAVSKCTACATDFSAFVRRHHCRNCGDIFCDKCTQGRIALTADENAQPVRVCDRCVAEVTQRLSNAREAASKPAGLQSHEDLAKKLQEEMERNRRASSGSKSDGSGRRMKEVACPTCTVHLQVQVPSSGSETIECGVCQHPFLVSAH